Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RMCT_4450Polyketide cyclase/dehydrase and lipid transport. (156 aa)    
Predicted Functional Partners:
RMCT_0284
Putative uncharacterized protein.
 
   
 0.598
PpsA_2
Beta-ketoacyl synthase.
  
 0.587
PetC1
glycine/D-amino acid oxidase, deaminating.
 
 
 0.584
RMCT_1233
Putative uncharacterized protein.
 
     0.581
Pks2
Polyketide synthase pks5.
  
 0.580
RMCT_1410
Putative uncharacterized protein.
 
 0.551
RMCT_2088
Hypothetical protein.
  
 
 0.548
Dps2
DNA-binding ferritin-like protein; Belongs to the Dps family.
       0.532
EryA_1
Acyl transferase domain-containing protein.
  
 0.528
RMCT_4410
Putative uncharacterized protein.
 
     0.518
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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