STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PdtaRTwo component system transcriptional regulator. (206 aa)    
Predicted Functional Partners:
PdtaS
Two component sensor kinase.
   
 0.917
BraC
Extracellular ligand-binding receptor.
  
 
 0.804
RpsA
30S ribosomal protein S1.
 
  
 0.762
GltB
Ferredoxin-dependent glutamate synthase, large subunit gltB.
  
  
 0.632
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  
 0.606
RMCT_3821
Protein of unknown function.
   
    0.585
RMCT_2150
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.540
RMCT_2415
Receptor ligand binding region family protein.
  
 
 0.540
AmiC
Extracellular ligand-binding receptor.
  
 
 0.540
RMCT_4455
Branched chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
     
 0.536
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.