Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BraCExtracellular ligand-binding receptor. (403 aa)    
Predicted Functional Partners:
RMCT_4455
Branched chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
LptB_2
Branched-chain amino acid ABC transporter ATPase.
 
 
 0.996
LivH_1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
LivF_1
Branched-chain amino acid ABC transporter ATPase.
 
 
 0.993
RMCT_2150
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
     
  0.900
PdtaR
Two component system transcriptional regulator.
  
 
 0.780
RMCT_3715
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.755
LivH_2
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.732
LivF_2
Urea ABC transporter, ATPase subunit UrtE.
 
  
 0.702
RMCT_2206
Response regulator receiver/ANTAR domain-containing protein.
  
 
 0.631
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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