STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4458UPF0235 protein KEK_02120; Belongs to the UPF0235 family. (78 aa)    
Predicted Functional Partners:
RMCT_4460
Lipid-transfer protein.
       0.786
RMCT_4461
Nucleic acid-binding protein.
       0.785
RMCT_4459
Hypothetical conserved membrane protein.
       0.773
RMCT_4462
Major facilitator transporter.
       0.713
CynR_1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.529
RMCT_2949
Putative uncharacterized protein.
 
     0.464
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.455
RMCT_3919
Transmembrane protein.
  
  
 0.451
RMCT_4465
Putative uncharacterized protein.
 
     0.433
RMCT_3668
Oxidoreductase.
 
     0.417
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.