STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TcyNABC transporter--like protein. (230 aa)    
Predicted Functional Partners:
RMCT_4513
Phosphonate metabolism PhnJ.
       0.773
GsiA_2
ABC transporter--like protein.
       0.773
RMCT_4516
Phosphonate metabolism protein PhnM.
       0.773
RMCT_4510
Putative uncharacterized protein.
   
   0.770
YurK
UbiC transcription regulator-associated domain-containing protein.
     
 0.731
phnC-2
Phosphonate ABC transporter ATPase; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
     
 0.717
PhnD_2
Phosphonate ABC transporter periplasmic phosphonate-binding protein.
  
    0.704
PhnE_2
Phosphonate ABC transporter inner membrane subunit.
       0.697
RMCT_4511
Putative uncharacterized protein.
       0.697
RMCT_4512
Phosphonate metabolism protein PhnI.
       0.697
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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