STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4565YceI protein; Belongs to the UPF0312 family. (184 aa)    
Predicted Functional Partners:
YhhW_2
Pirin-related protein; Belongs to the pirin family.
 
   
 0.586
RMCT_3725
Putative uncharacterized protein; Belongs to the UPF0312 family.
  
     0.507
RMCT_0847
DsbA oxidoreductase.
  
  
 0.457
RMCT_1067
Pyridoxamine 5'-phosphate oxidase-like protein.
 
  
 0.453
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.449
RMCT_4566
Putative uncharacterized protein.
       0.445
Dps
Ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.433
Dps2
DNA-binding ferritin-like protein; Belongs to the Dps family.
  
  
 0.433
RMCT_1064
Acetyltransferase.
  
  
 0.432
FdxA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.422
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.