STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4577Lipoprotein lpqW. (624 aa)    
Predicted Functional Partners:
TypA
GTP-binding translation elongation factor typA.
  
    0.826
lpqB
Lipoprotein LpqB.
  
   
 0.770
RMCT_2341
Conserved protein of unknown function.
 
   
 0.769
RMCT_2544
Transmembrane protein.
  
   
 0.768
RMCT_0550
Hypothetical protein.
 
     0.762
RMCT_2757
Putative uncharacterized protein.
 
     0.762
RMCT_3480
Hypothetical protein.
  
     0.759
RMCT_4008
Secreted protein.
 
     0.754
RMCT_0712
Transmembrane protein.
  
     0.749
GsiC_3
Oligopeptide-transport integral membrane protein ABC transporter oppB.
 
 
 0.746
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.