STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Frc_15L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (403 aa)    
Predicted Functional Partners:
RMCT_4619
Aldehyde dehydrogenase (NAD) family protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.804
RMCT_4621
Glyoxalase.
  
    0.799
RMCT_4617
acyl-CoA dehydrogenase.
 
 
  0.778
Frc_18
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
     0.774
Frc_1
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
  
     0.774
RMCT_4618
acyl-CoA dehydrogenase.
  
 
  0.746
RMCT_4616
Long-chain specific acyl-CoA dehydrogenase.
  
 
  0.743
Oxc
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
 
 
 0.586
KasA_2
Fatty acid synthase.
  
 0.575
RMCT_2392
Putative uncharacterized protein.
 
 
 0.569
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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