Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4630Amidohydrolase. (383 aa)    
Predicted Functional Partners:
RMCT_4628
Acyl dehydratase.
 
     0.891
RMCT_4623
Putative uncharacterized protein.
 
     0.855
RMCT_4629
Thiolase.
 
     0.838
RMCT_4626
Carveol dehydrogenase.
 
    0.799
Frc_14
Putative uncharacterized protein; Belongs to the CoA-transferase III family.
 
    0.797
RMCT_4627
Putative uncharacterized protein.
       0.787
BetB
Aldehyde dehydrogenase.
  
  
 0.746
RMCT_4624
Putative uncharacterized protein.
       0.727
RMCT_4622
Transposase for insertion sequence element.
       0.716
RMCT_1627
Putative aminoglycoside phosphotransferase.
 
    0.694
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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