Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DnaK_1 | GerE | RMCT_4054 | RMCT_4035 | Molecular chaperone. | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.663 |
DnaK_1 | RMCT_1130 | RMCT_4054 | RMCT_1130 | Molecular chaperone. | Hypothetical protein. | 0.680 |
DnaK_1 | RMCT_1519 | RMCT_4054 | RMCT_1519 | Molecular chaperone. | Septum formation initiator. | 0.457 |
DnaK_1 | RMCT_3905 | RMCT_4054 | RMCT_3905 | Molecular chaperone. | FHA domain-containing protein. | 0.416 |
DnaK_1 | RMCT_4649 | RMCT_4054 | RMCT_4649 | Molecular chaperone. | Conserved membrane protein of unknown function. | 0.722 |
GerE | DnaK_1 | RMCT_4035 | RMCT_4054 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Molecular chaperone. | 0.663 |
GerE | RMCT_0696 | RMCT_4035 | RMCT_0696 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Transmembrane protein. | 0.591 |
GerE | RMCT_1130 | RMCT_4035 | RMCT_1130 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein. | 0.710 |
GerE | RMCT_1519 | RMCT_4035 | RMCT_1519 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Septum formation initiator. | 0.501 |
GerE | RMCT_3905 | RMCT_4035 | RMCT_3905 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | FHA domain-containing protein. | 0.678 |
GerE | RMCT_4034 | RMCT_4035 | RMCT_4034 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Molecular chaperone. | 0.879 |
GerE | RMCT_4649 | RMCT_4035 | RMCT_4649 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Conserved membrane protein of unknown function. | 0.723 |
RMCT_0696 | GerE | RMCT_0696 | RMCT_4035 | Transmembrane protein. | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.591 |
RMCT_0696 | RMCT_1130 | RMCT_0696 | RMCT_1130 | Transmembrane protein. | Hypothetical protein. | 0.735 |
RMCT_0696 | RMCT_1425 | RMCT_0696 | RMCT_1425 | Transmembrane protein. | Putative uncharacterized protein. | 0.612 |
RMCT_0696 | RMCT_2544 | RMCT_0696 | RMCT_2544 | Transmembrane protein. | Transmembrane protein. | 0.594 |
RMCT_0696 | RMCT_2757 | RMCT_0696 | RMCT_2757 | Transmembrane protein. | Putative uncharacterized protein. | 0.588 |
RMCT_0696 | RMCT_3905 | RMCT_0696 | RMCT_3905 | Transmembrane protein. | FHA domain-containing protein. | 0.755 |
RMCT_0696 | RMCT_4649 | RMCT_0696 | RMCT_4649 | Transmembrane protein. | Conserved membrane protein of unknown function. | 0.740 |
RMCT_1130 | DnaK_1 | RMCT_1130 | RMCT_4054 | Hypothetical protein. | Molecular chaperone. | 0.680 |
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