Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CysG_1 | CysG_2 | RMCT_2617 | RMCT_4281 | uroporphyrin-III C-methyltransferase hemD. | Multi-functional enzyme siroheme synthase cysG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | 0.995 |
CysG_1 | RMCT_4652 | RMCT_2617 | RMCT_4652 | uroporphyrin-III C-methyltransferase hemD. | Rieske (2Fe-2S) domain-containing protein. | 0.619 |
CysG_1 | ThcD | RMCT_2617 | RMCT_0421 | uroporphyrin-III C-methyltransferase hemD. | Ferredoxin reductase. | 0.698 |
CysG_2 | CysG_1 | RMCT_4281 | RMCT_2617 | Multi-functional enzyme siroheme synthase cysG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | uroporphyrin-III C-methyltransferase hemD. | 0.995 |
CysG_2 | RMCT_4652 | RMCT_4281 | RMCT_4652 | Multi-functional enzyme siroheme synthase cysG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | Rieske (2Fe-2S) domain-containing protein. | 0.645 |
CysG_2 | ThcD | RMCT_4281 | RMCT_0421 | Multi-functional enzyme siroheme synthase cysG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | Ferredoxin reductase. | 0.712 |
RMCT_0899 | RMCT_1407 | RMCT_0899 | RMCT_1407 | Protein of unknown function. | Hypothetical protein. | 0.402 |
RMCT_0899 | RMCT_4652 | RMCT_0899 | RMCT_4652 | Protein of unknown function. | Rieske (2Fe-2S) domain-containing protein. | 0.704 |
RMCT_1133 | RMCT_1407 | RMCT_1133 | RMCT_1407 | Hypothetical protein. | Hypothetical protein. | 0.732 |
RMCT_1133 | RMCT_4652 | RMCT_1133 | RMCT_4652 | Hypothetical protein. | Rieske (2Fe-2S) domain-containing protein. | 0.650 |
RMCT_1407 | RMCT_0899 | RMCT_1407 | RMCT_0899 | Hypothetical protein. | Protein of unknown function. | 0.402 |
RMCT_1407 | RMCT_1133 | RMCT_1407 | RMCT_1133 | Hypothetical protein. | Hypothetical protein. | 0.732 |
RMCT_1407 | RMCT_4652 | RMCT_1407 | RMCT_4652 | Hypothetical protein. | Rieske (2Fe-2S) domain-containing protein. | 0.680 |
RMCT_4652 | CysG_1 | RMCT_4652 | RMCT_2617 | Rieske (2Fe-2S) domain-containing protein. | uroporphyrin-III C-methyltransferase hemD. | 0.619 |
RMCT_4652 | CysG_2 | RMCT_4652 | RMCT_4281 | Rieske (2Fe-2S) domain-containing protein. | Multi-functional enzyme siroheme synthase cysG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | 0.645 |
RMCT_4652 | RMCT_0899 | RMCT_4652 | RMCT_0899 | Rieske (2Fe-2S) domain-containing protein. | Protein of unknown function. | 0.704 |
RMCT_4652 | RMCT_1133 | RMCT_4652 | RMCT_1133 | Rieske (2Fe-2S) domain-containing protein. | Hypothetical protein. | 0.650 |
RMCT_4652 | RMCT_1407 | RMCT_4652 | RMCT_1407 | Rieske (2Fe-2S) domain-containing protein. | Hypothetical protein. | 0.680 |
RMCT_4652 | RMCT_4653 | RMCT_4652 | RMCT_4653 | Rieske (2Fe-2S) domain-containing protein. | Acyltransferase. | 0.659 |
RMCT_4652 | RMCT_4654 | RMCT_4652 | RMCT_4654 | Rieske (2Fe-2S) domain-containing protein. | Acyltransferase. | 0.657 |
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