Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
RMCT_4654Acyltransferase. (249 aa)    
Predicted Functional Partners:
RMCT_4653
Acyltransferase.
 
    
0.838
YidA
Cof family hydrolase.
  
  
 0.739
RMCT_4652
Rieske (2Fe-2S) domain-containing protein.
  
  
 0.649
PlsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
  
 
 0.612
CdsA
Membrane phosphatidate cytidylyltransferase cdsA; Belongs to the CDS family.
    
 0.572
CtpF_2
Metal cation transporter P-type ATPase ctpE.
   
 0.560
YloB_1
P-type HAD superfamily ATPase.
   
 0.560
YloB_2
P-type HAD superfamily ATPase.
   
 0.560
CtpF_1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
 0.560
PpsA_2
Beta-ketoacyl synthase.
  
 0.525
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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