Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DagK | FbpC_5 | RMCT_3809 | RMCT_4664 | Diacylglycerol kinase. | Esterase. | 0.900 |
FbpC_5 | DagK | RMCT_4664 | RMCT_3809 | Esterase. | Diacylglycerol kinase. | 0.900 |
FbpC_5 | PpsA_7 | RMCT_4664 | RMCT_4669 | Esterase. | Polyketide synthase pks13. | 0.697 |
FbpC_5 | RMCT_0113 | RMCT_4664 | RMCT_0113 | Esterase. | Protease. | 0.689 |
FbpC_5 | RMCT_0667 | RMCT_4664 | RMCT_0667 | Esterase. | Integral membrane protein. | 0.643 |
FbpC_5 | RMCT_1437 | RMCT_4664 | RMCT_1437 | Esterase. | Hypothetical protein. | 0.604 |
FbpC_5 | RMCT_1569 | RMCT_4664 | RMCT_1569 | Esterase. | Putative uncharacterized protein. | 0.573 |
FbpC_5 | RMCT_2733 | RMCT_4664 | RMCT_2733 | Esterase. | Conserved membrane protein. | 0.641 |
FbpC_5 | RMCT_4662 | RMCT_4664 | RMCT_4662 | Esterase. | Transmembrane protein. | 0.836 |
FbpC_5 | RMCT_4667 | RMCT_4664 | RMCT_4667 | Esterase. | Cutinase. | 0.829 |
FbpC_5 | groES | RMCT_4664 | RMCT_0565 | Esterase. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.574 |
PpsA_7 | FbpC_5 | RMCT_4669 | RMCT_4664 | Polyketide synthase pks13. | Esterase. | 0.697 |
PpsA_7 | RMCT_0113 | RMCT_4669 | RMCT_0113 | Polyketide synthase pks13. | Protease. | 0.572 |
PpsA_7 | RMCT_0667 | RMCT_4669 | RMCT_0667 | Polyketide synthase pks13. | Integral membrane protein. | 0.575 |
PpsA_7 | RMCT_4662 | RMCT_4669 | RMCT_4662 | Polyketide synthase pks13. | Transmembrane protein. | 0.700 |
PpsA_7 | RMCT_4667 | RMCT_4669 | RMCT_4667 | Polyketide synthase pks13. | Cutinase. | 0.889 |
PpsA_7 | groES | RMCT_4669 | RMCT_0565 | Polyketide synthase pks13. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.492 |
RMCT_0113 | FbpC_5 | RMCT_0113 | RMCT_4664 | Protease. | Esterase. | 0.689 |
RMCT_0113 | PpsA_7 | RMCT_0113 | RMCT_4669 | Protease. | Polyketide synthase pks13. | 0.572 |
RMCT_0113 | RMCT_0667 | RMCT_0113 | RMCT_0667 | Protease. | Integral membrane protein. | 0.758 |
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