Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AftA | DprE1_2 | RMCT_4675 | RMCT_4677 | Transmembrane protein. | Oxidoreductase. | 0.913 |
AftA | EmbC_1 | RMCT_4675 | RMCT_4674 | Transmembrane protein. | Integral membrane indolylacetylinositol arabinosyltransferase embC. | 0.998 |
AftA | EmbC_2 | RMCT_4675 | RMCT_4672 | Transmembrane protein. | Integral membrane indolylacetylinositol arabinosyltransferase embB. | 0.989 |
AftA | RMCT_4676 | RMCT_4675 | RMCT_4676 | Transmembrane protein. | Short chain dehydrogenase. | 0.952 |
AftA | RMCT_4678 | RMCT_4675 | RMCT_4678 | Transmembrane protein. | Alpha/beta hydrolase. | 0.621 |
AftA | RMCT_4679 | RMCT_4675 | RMCT_4679 | Transmembrane protein. | Alpha/beta hydrolase. | 0.711 |
AftA | RMCT_4680 | RMCT_4675 | RMCT_4680 | Transmembrane protein. | Lipoprotein LppV. | 0.557 |
AftA | RMCT_4681 | RMCT_4675 | RMCT_4681 | Transmembrane protein. | Putative uncharacterized protein. | 0.557 |
AftA | RMCT_4682 | RMCT_4675 | RMCT_4682 | Transmembrane protein. | Lipoprotein LppV. | 0.557 |
AftA | RMCT_4683 | RMCT_4675 | RMCT_4683 | Transmembrane protein. | Putative uncharacterized protein. | 0.557 |
DprE1_2 | AftA | RMCT_4677 | RMCT_4675 | Oxidoreductase. | Transmembrane protein. | 0.913 |
DprE1_2 | EmbC_1 | RMCT_4677 | RMCT_4674 | Oxidoreductase. | Integral membrane indolylacetylinositol arabinosyltransferase embC. | 0.958 |
DprE1_2 | EmbC_2 | RMCT_4677 | RMCT_4672 | Oxidoreductase. | Integral membrane indolylacetylinositol arabinosyltransferase embB. | 0.886 |
DprE1_2 | RMCT_4676 | RMCT_4677 | RMCT_4676 | Oxidoreductase. | Short chain dehydrogenase. | 0.997 |
DprE1_2 | RMCT_4678 | RMCT_4677 | RMCT_4678 | Oxidoreductase. | Alpha/beta hydrolase. | 0.572 |
DprE1_2 | RMCT_4679 | RMCT_4677 | RMCT_4679 | Oxidoreductase. | Alpha/beta hydrolase. | 0.572 |
DprE1_2 | RMCT_4680 | RMCT_4677 | RMCT_4680 | Oxidoreductase. | Lipoprotein LppV. | 0.572 |
DprE1_2 | RMCT_4681 | RMCT_4677 | RMCT_4681 | Oxidoreductase. | Putative uncharacterized protein. | 0.572 |
DprE1_2 | RMCT_4682 | RMCT_4677 | RMCT_4682 | Oxidoreductase. | Lipoprotein LppV. | 0.572 |
DprE1_2 | RMCT_4683 | RMCT_4677 | RMCT_4683 | Oxidoreductase. | Putative uncharacterized protein. | 0.572 |
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