STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KstR2_2TetR family transcriptional regulator. (234 aa)    
Predicted Functional Partners:
RMCT_3970
Phytoene dehydrogenase family protein.
 
   
 0.701
RMCT_3980
Putative uncharacterized protein.
 
   
 0.697
FadR_2
TetR family transcriptional regulator.
  
     0.656
PaaJ
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.644
fadE
acyl-CoA dehydrogenase.
     
 0.641
AntB
Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase.
  
     0.620
CbdA
Dioxygenase large subunit.
 
   
 0.608
RMCT_4686
Putative uncharacterized protein.
     
 0.605
RMCT_4687
Putative uncharacterized protein.
       0.595
YvdT_1
TetR family transcriptional regulator.
  
    0.532
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.