STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XerD_3Putative acylphosphatase; Belongs to the 'phage' integrase family. (350 aa)    
Predicted Functional Partners:
XerD_2
Phage integrase family protein.
 
    
0.849
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
 
    0.741
RMCT_2313
Hypothetical protein.
  
    0.718
SpoIIIE
Cell division transmembrane protein ftsK.
 
   
 0.700
whiA
Transcriptional regulatory protein whiA; Involved in cell division and chromosome segregation.
  
  
 0.670
YedK
Bacteriophage protein; Belongs to the SOS response-associated peptidase family.
  
  
 0.660
TyrC
Prephenate dehydrogenase.
  
    0.654
ParB
Chromosome partitioning protein parB; Belongs to the ParB family.
 
  
 0.577
FtsW_2
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.569
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
 
  
 0.567
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.