STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFW60178.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
OFW60109.1
Daunorubicin/doxorubicin resistance ABC transporter ATP-binding protein DrrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
OFW60512.1
Daunorubicin/doxorubicin resistance ABC transporter ATP-binding protein DrrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
OFW59019.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.881
OFW60182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.849
OFW57995.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.825
OFW57120.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.792
OFW60171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.748
OFW57114.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.691
OFW59959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.636
OFW60156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.597
Your Current Organism:
Actinobacteria bacterium RBG135518
NCBI taxonomy Id: 1797197
Other names: A. bacterium RBG_13_55_18, Actinobacteria bacterium RBG_13_55_18
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