OFX06581.1 protein (Alphaproteobacteria bacterium RIFCSPLOWO202FULL4354)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

OFX06581.1

30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)

Predicted Functional Partners:

OFX06118.1

0.999

OFX05313.1

0.999

OFX04999.1

0.999

OFX05000.1

0.999

OFX06567.1

0.999

OFX06568.1

0.999

OFX06570.1

0.999

OFX06573.1

0.999

OFX06575.1

0.999

OFX06576.1

0.999

Your Current Organism:

Alphaproteobacteria bacterium RIFCSPLOWO202FULL4354

NCBI taxonomy Id: 1797230
Other names: A. bacterium RIFCSPLOWO2_02_FULL_43_54, Alphaproteobacteria bacterium RIFCSPLOWO2_02_FULL_43_54

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OFX04999.1	OFX05000.1	A3H46_01260	A3H46_01265	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX05313.1	A3H46_01260	A3H46_01170	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06118.1	A3H46_01260	A3H46_00900	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06567.1	A3H46_01260	A3H46_01540	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06568.1	A3H46_01260	A3H46_01545	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06570.1	A3H46_01260	A3H46_01555	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
OFX04999.1	OFX06573.1	A3H46_01260	A3H46_01570	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06575.1	A3H46_01260	A3H46_01580	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06576.1	A3H46_01260	A3H46_01585	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX04999.1	OFX06581.1	A3H46_01260	A3H46_01610	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX04999.1	A3H46_01265	A3H46_01260	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX05313.1	A3H46_01265	A3H46_01170	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06118.1	A3H46_01265	A3H46_00900	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06567.1	A3H46_01265	A3H46_01540	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06568.1	A3H46_01265	A3H46_01545	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06570.1	A3H46_01265	A3H46_01555	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
OFX05000.1	OFX06573.1	A3H46_01265	A3H46_01570	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06575.1	A3H46_01265	A3H46_01580	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06576.1	A3H46_01265	A3H46_01585	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OFX05000.1	OFX06581.1	A3H46_01265	A3H46_01610	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999

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