STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFX23371.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (140 aa)    
Predicted Functional Partners:
OFX23370.1
Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.930
OFX23369.1
Type II and III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
     0.914
OFX23439.1
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.901
OFX23367.1
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.892
OFX23366.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.870
OFX23368.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
OFX23372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
OFX23365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.679
OFX23363.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.635
OFX23364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.635
Your Current Organism:
Anaeromyxobacter sp. RBG166914
NCBI taxonomy Id: 1797238
Other names: A. sp. RBG_16_69_14, Anaeromyxobacter sp. RBG_16_69_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.