STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY30761.1Protein-export membrane protein SecD; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)    
Predicted Functional Partners:
OGY30760.1
Protein-export membrane protein SecF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.999
OGY30907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.984
OGY31416.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.978
OGY31483.1
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OGY30804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.946
OGY31481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.925
OGY30915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.867
OGY30994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.820
OGY31358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.808
OGY30759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.795
Your Current Organism:
Andersenbacteria bacterium RIFCSPHIGHO201FULL4636
NCBI taxonomy Id: 1797278
Other names: C. Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36, Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.