STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY31371.1DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1237 aa)    
Predicted Functional Partners:
OGY30806.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGY31370.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OGY30686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.998
OGY30752.1
Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.996
OGY30750.1
Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.995
OGY31536.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
OGY31242.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.990
OGY31484.1
Transcription termination/antitermination protein NusG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.986
OGY31278.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
OGY31420.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.982
Your Current Organism:
Andersenbacteria bacterium RIFCSPHIGHO201FULL4636
NCBI taxonomy Id: 1797278
Other names: C. Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36, Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.