STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY30957.1Conjugal transfer protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)    
Predicted Functional Partners:
OGY30956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
OGY30900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGY30901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGY31237.1
DNA topoisomerase I; Catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.658
OGY30671.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.524
OGY30897.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.512
OGY30899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.502
OGY30927.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.497
OGY31383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.493
OGY30955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
Your Current Organism:
Andersenbacteria bacterium RIFCSPHIGHO201FULL4636
NCBI taxonomy Id: 1797278
Other names: C. Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36, Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.