STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFX29876.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (416 aa)    
Predicted Functional Partners:
OFX29877.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.768
OFX28629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.664
OFX35990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.599
OFX28660.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.587
OFX29116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.543
OFX37167.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.539
OFX32625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
tdk
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.465
OFX33880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.464
OFX38376.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
  
 0.456
Your Current Organism:
Bacteroidetes bacterium GWA23217
NCBI taxonomy Id: 1797316
Other names: B. bacterium GWA2_32_17, Bacteroidetes bacterium GWA2_32_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.