STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFX42116.1Amino acid oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
OFX42115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.884
OFX38575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.784
OFX42117.1
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.773
OFX42130.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.770
OFX42121.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
OFX37411.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
OFX38982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.762
OFX37465.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
OFX38405.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
OFX37618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.729
Your Current Organism:
Bacteroidetes bacterium GWA24015
NCBI taxonomy Id: 1797319
Other names: B. bacterium GWA2_40_15, Bacteroidetes bacterium GWA2_40_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.