STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFX70541.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)    
Predicted Functional Partners:
OFX70852.1
Twin arginine-targeting protein translocase TatC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OFX67381.1
Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.961
OFX68216.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.951
OFX70803.1
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.664
OFX70542.1
Protein translocase subunit SecDF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.660
OFX70804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.561
OFX68126.1
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.561
OFX67458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.561
OFX70539.1
TIGR02757 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.525
OFX68609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.514
Your Current Organism:
Bacteroidetes bacterium GWD23333
NCBI taxonomy Id: 1797328
Other names: B. bacterium GWD2_33_33, Bacteroidetes bacterium GWD2_33_33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.