STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFX81865.1Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology. (1032 aa)    
Predicted Functional Partners:
OFX81866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.971
OFX81864.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.949
OFX80525.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.813
OFX81292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.813
OFX79505.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  0.791
OFX79563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.776
OFX81784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.680
OFX81867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.651
OFX81121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.588
OFX79537.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
  0.493
Your Current Organism:
Bacteroidetes bacterium GWE24015
NCBI taxonomy Id: 1797334
Other names: B. bacterium GWE2_40_15, Bacteroidetes bacterium GWE2_40_15
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.