STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFY32170.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)    
Predicted Functional Partners:
OFY32171.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.973
OFY28617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.940
A2X01_19870
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.916
OFY28627.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.906
OFY30380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.902
OFY30378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.901
OFY30383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.900
OFY28281.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.890
OFY32486.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
0.884
OFY29845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.872
Your Current Organism:
Bacteroidetes bacterium GWF23548
NCBI taxonomy Id: 1797343
Other names: B. bacterium GWF2_35_48, Bacteroidetes bacterium GWF2_35_48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.