STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ02807.1Carbamoyltransferase HypF; Derived by automated computational analysis using gene prediction method: Protein Homology. (789 aa)    
Predicted Functional Partners:
OFZ02810.1
Hydrogenase expression/formation protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OFZ02808.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.977
OFZ02809.1
Hydrogenase formation protein HypD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
OFZ02811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.949
OFZ02813.1
Hydrogenase accessory protein HypB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.852
OFZ03278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.750
OFZ05602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.699
OFZ02812.1
6-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.650
OFZ05257.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.630
OFZ04992.1
Acetyl CoA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.604
Your Current Organism:
Bdellovibrionales bacterium GWA15235
NCBI taxonomy Id: 1797383
Other names: B. bacterium GWA1_52_35, Bdellovibrionales bacterium GWA1_52_35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.