STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ19907.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (331 aa)    
Predicted Functional Partners:
OFZ19906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OFZ18796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.740
OFZ19908.1
ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
OFZ20854.1
Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  
 0.557
OFZ19909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.498
OFZ22234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.489
OFZ22786.1
Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.483
OFZ18511.1
NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.
  
 
 0.481
OFZ18720.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.474
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.469
Your Current Organism:
Bdellovibrionales bacterium GWB1558
NCBI taxonomy Id: 1797386
Other names: B. bacterium GWB1_55_8, Bdellovibrionales bacterium GWB1_55_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.