STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ29206.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (330 aa)    
Predicted Functional Partners:
OFZ28972.1
Nitrite reductase, copper-containing; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase family.
  
 0.942
OFZ29219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.928
OFZ31088.1
Cytochrome C oxidase Cbb3; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.884
OFZ29785.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.876
OFZ31813.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
  0.874
OFZ29151.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.734
OFZ29207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.732
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
 
 0.617
OFZ31812.1
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.604
OFZ31727.1
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
  0.604
Your Current Organism:
Bdellovibrionales bacterium RIFCSPHIGHO201FULL4029
NCBI taxonomy Id: 1797389
Other names: B. bacterium RIFCSPHIGHO2_01_FULL_40_29, Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29
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