STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ22078.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (324 aa)    
Predicted Functional Partners:
OFZ22079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.980
OFZ22080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.800
OFZ22081.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.756
OFZ22082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.672
OFZ22077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.413
Your Current Organism:
Bdellovibrionales bacterium RIFOXYA1FULL3614
NCBI taxonomy Id: 1797391
Other names: B. bacterium RIFOXYA1_FULL_36_14, Bdellovibrionales bacterium RIFOXYA1_FULL_36_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.