STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ49084.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (287 aa)    
Predicted Functional Partners:
OFZ49083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
OFZ46883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.500
OFZ49082.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
     
 0.497
OFZ49686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.486
OFZ50126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.485
OFZ52584.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.480
OFZ46879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.477
OFZ49085.1
acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.476
OFZ46871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.470
OFZ51225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.459
Your Current Organism:
Bdellovibrionales bacterium RIFOXYC1FULL3779
NCBI taxonomy Id: 1797395
Other names: B. bacterium RIFOXYC1_FULL_37_79, Bdellovibrionales bacterium RIFOXYC1_FULL_37_79
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