close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ78144.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (196 aa)    
Predicted Functional Partners:
OFZ76278.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.975
OFZ78143.1
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.970
OFZ78032.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.923
OFZ76277.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.876
tsf
EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.864
OFZ78033.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.855
OFZ76295.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.853
OFZ76273.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.852
OFZ76294.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.852
OFZ77887.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.851
Your Current Organism:
Bdellovibrionales bacterium RIFOXYD1FULL3984
NCBI taxonomy Id: 1797401
Other names: B. bacterium RIFOXYD1_FULL_39_84, Bdellovibrionales bacterium RIFOXYD1_FULL_39_84
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.