Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OFZ77207.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (472 aa)    
Predicted Functional Partners:
OFZ77206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.556
OFZ77205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.526
OFZ77204.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
OFZ77203.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.442
OFZ77202.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.412
Your Current Organism:
Bdellovibrionales bacterium RIFOXYD1FULL3984
NCBI taxonomy Id: 1797401
Other names: B. bacterium RIFOXYD1_FULL_39_84, Bdellovibrionales bacterium RIFOXYD1_FULL_39_84
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