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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ77471.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (482 aa)    
Predicted Functional Partners:
OFZ77472.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OFZ77473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.976
OFZ77883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.946
OFZ76288.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.942
OFZ74979.1
Ribosome biogenesis GTP-binding protein YsxC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.936
OFZ77518.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.931
OFZ74965.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.922
OFZ78033.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.916
OFZ77469.1
Ribonuclease P protein component; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.915
OFZ78032.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.910
Your Current Organism:
Bdellovibrionales bacterium RIFOXYD1FULL3984
NCBI taxonomy Id: 1797401
Other names: B. bacterium RIFOXYD1_FULL_39_84, Bdellovibrionales bacterium RIFOXYD1_FULL_39_84
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