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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ74784.1CDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)    
Predicted Functional Partners:
OFZ74783.1
Glucose-1-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
OFZ78038.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.972
OFZ76276.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.972
OFZ76281.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.969
OFZ76278.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.968
OFZ78039.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.967
OFZ76733.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.967
OFZ76271.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.967
OFZ76284.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.967
OFZ76305.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.967
Your Current Organism:
Bdellovibrionales bacterium RIFOXYD1FULL3984
NCBI taxonomy Id: 1797401
Other names: B. bacterium RIFOXYD1_FULL_39_84, Bdellovibrionales bacterium RIFOXYD1_FULL_39_84
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