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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ74808.1single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (571 aa)    
Predicted Functional Partners:
OFZ74179.1
DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.865
OFZ74117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.769
OFZ74564.1
Primosomal protein N; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.731
OFZ76922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.729
OFZ76233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.719
OFZ78091.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.714
OFZ74807.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.694
OFZ75616.1
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.676
OFZ76939.1
Ribonuclease HI; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.663
OFZ74617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.648
Your Current Organism:
Bdellovibrionales bacterium RIFOXYD1FULL3984
NCBI taxonomy Id: 1797401
Other names: B. bacterium RIFOXYD1_FULL_39_84, Bdellovibrionales bacterium RIFOXYD1_FULL_39_84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.