Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OGA46853.1 | OGA46854.1 | A3F74_27485 | A3F74_27490 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.559 |
OGA46853.1 | OGA46881.1 | A3F74_27485 | A3F74_27495 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
OGA46854.1 | OGA46853.1 | A3F74_27490 | A3F74_27485 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.559 |
OGA46854.1 | OGA46855.1 | A3F74_27490 | A3F74_27500 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
OGA46854.1 | OGA46881.1 | A3F74_27490 | A3F74_27495 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
OGA46855.1 | OGA46854.1 | A3F74_27500 | A3F74_27490 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.401 |
OGA46855.1 | OGA46881.1 | A3F74_27500 | A3F74_27495 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.542 |
OGA46881.1 | OGA46853.1 | A3F74_27495 | A3F74_27485 | Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.934 |
OGA46881.1 | OGA46854.1 | A3F74_27495 | A3F74_27490 | Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.556 |
OGA46881.1 | OGA46855.1 | A3F74_27495 | A3F74_27500 | Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.542 |