STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGA57706.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (272 aa)    
Predicted Functional Partners:
A3F77_11860
4Fe-4S ferredoxin; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.946
OGA65261.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.946
OGA66045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.935
OGA71732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.898
A3F77_07150
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.861
OGA69860.1
Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.851
OGA69862.1
2-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.847
OGA65171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.842
OGA69879.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.837
A3F77_05405
acid--CoA ligase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.824
Your Current Organism:
Betaproteobacteria bacterium RIFCSPLOWO212FULL6728
NCBI taxonomy Id: 1797503
Other names: B. bacterium RIFCSPLOWO2_12_FULL_67_28, Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28
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