STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY07251.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (341 aa)    
Predicted Functional Partners:
A2694_00075
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
 
   
 0.881
OGY07252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.573
OGY07253.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.458
OGY07254.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.400
Your Current Organism:
Blackburnbacteria bacterium RIFCSPHIGHO201FULL4017
NCBI taxonomy Id: 1797512
Other names: C. Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17, Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.