STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY07417.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)    
Predicted Functional Partners:
OGY07478.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.836
OGY07418.1
Ribosome recycling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.795
OGY07597.1
Di-trans,poly-cis-decaprenylcistransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.739
OGY06770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.657
OGY07419.1
Translation elongation factor Ts; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
OGY07420.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.558
OGY07415.1
proline--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.533
A2694_03115
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
OGY06963.1
glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.455
OGY07055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.447
Your Current Organism:
Blackburnbacteria bacterium RIFCSPHIGHO201FULL4017
NCBI taxonomy Id: 1797512
Other names: C. Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17, Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.