STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY07089.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (129 aa)    
Predicted Functional Partners:
OGY07094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.984
OGY07093.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.892
OGY07371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.854
OGY07090.1
Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.824
OGY07091.1
Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.823
OGY07092.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.823
OGY07088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.625
OGY07087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
OGY07095.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
OGY07086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.524
Your Current Organism:
Blackburnbacteria bacterium RIFCSPHIGHO201FULL4017
NCBI taxonomy Id: 1797512
Other names: C. Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17, Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.