STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY07144.1Transcription termination/antitermination factor NusG; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
OGY07706.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.998
OGY07707.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
OGY06991.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
OGY07444.1
Transcription termination factor NusA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.995
OGY07020.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
OGY07097.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
OGY07226.1
Transcription antitermination factor NusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.980
OGY07001.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
OGY07096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.960
OGY07009.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.958
Your Current Organism:
Blackburnbacteria bacterium RIFCSPHIGHO201FULL4017
NCBI taxonomy Id: 1797512
Other names: C. Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17, Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.