STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY07010.150S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)    
Predicted Functional Partners:
OGY07708.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGY07709.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGY07713.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGY07441.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGY07443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.999
OGY07453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGY07176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGY07223.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGY07233.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGY07234.1
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
Your Current Organism:
Blackburnbacteria bacterium RIFCSPHIGHO201FULL4017
NCBI taxonomy Id: 1797512
Other names: C. Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17, Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.