STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY44539.1Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
OGY44522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
0.883
OGY44521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
  0.844
OGY45529.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.828
OGY44519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.776
OGY44520.1
Dolichyl-phosphate beta-D-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.773
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
  0.602
OGY44938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.602
OGY44524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.594
OGY44523.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.588
OGY43780.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.580
Your Current Organism:
Buchananbacteria bacterium RIFCSPHIGHO201FULL3914
NCBI taxonomy Id: 1797532
Other names: C. Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_14, Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_14
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