STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY44078.1DNA primase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (647 aa)    
Predicted Functional Partners:
OGY44713.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGY44077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.973
OGY44706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.886
OGY43546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.817
OGY43796.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.803
OGY43651.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.798
OGY44079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.795
OGY44259.1
ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.782
OGY43586.1
Holliday junction DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.773
OGY44080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
Your Current Organism:
Buchananbacteria bacterium RIFCSPHIGHO201FULL4035
NCBI taxonomy Id: 1797534
Other names: C. Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_40_35, Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_40_35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.