STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGB02756.1Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)    
Predicted Functional Partners:
OGB03887.1
Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
OGB04665.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.974
OGB01521.1
glutamyl-tRNA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
OGB02841.1
Hydroxymethylbilane synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.940
OGB05942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.939
OGB05070.1
uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
OGB02757.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.813
OGB02977.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.811
OGB05045.1
Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.801
OGB02952.1
Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.703
Your Current Organism:
Burkholderiales bacterium RIFCSPHIGHO212FULL6320
NCBI taxonomy Id: 1797558
Other names: B. bacterium RIFCSPHIGHO2_12_FULL_63_20, Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.