STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGB02813.1Coenzyme A pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
OGB03143.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
OGB05572.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
OGB03376.1
ATP-dependent RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
OGB02967.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
OGB02487.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
OGB01883.1
ATP-dependent RNA helicase DbpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
OGB02251.1
Ribonuclease III; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.834
OGB01267.1
ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.824
OGB04769.1
Ribonuclease II; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.792
OGB03317.1
Ribonuclease II; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.792
Your Current Organism:
Burkholderiales bacterium RIFCSPHIGHO212FULL6320
NCBI taxonomy Id: 1797558
Other names: B. bacterium RIFCSPHIGHO2_12_FULL_63_20, Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.