Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OGB44972.1 | OGB48421.1 | A3F76_14985 | A3F76_13085 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | 0.747 |
| OGB48419.1 | OGB48421.1 | A3F76_13075 | A3F76_13085 | Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | 0.750 |
| OGB48419.1 | OGB48422.1 | A3F76_13075 | A3F76_13090 | Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.740 |
| OGB48419.1 | dapE | A3F76_13075 | A3F76_13080 | Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.729 |
| OGB48421.1 | OGB44972.1 | A3F76_13085 | A3F76_14985 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.747 |
| OGB48421.1 | OGB48419.1 | A3F76_13085 | A3F76_13075 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.750 |
| OGB48421.1 | OGB48422.1 | A3F76_13085 | A3F76_13090 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| OGB48421.1 | OGB48723.1 | A3F76_13085 | A3F76_02665 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.639 |
| OGB48421.1 | atpA | A3F76_13085 | A3F76_14710 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.666 |
| OGB48421.1 | atpE | A3F76_13085 | A3F76_14695 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.742 |
| OGB48421.1 | atpG | A3F76_13085 | A3F76_14715 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.667 |
| OGB48421.1 | atpH | A3F76_13085 | A3F76_14705 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.742 |
| OGB48421.1 | dapE | A3F76_13085 | A3F76_13080 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.864 |
| OGB48421.1 | prfA | A3F76_13085 | A3F76_09580 | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.975 |
| OGB48422.1 | OGB48419.1 | A3F76_13090 | A3F76_13075 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.740 |
| OGB48422.1 | OGB48421.1 | A3F76_13090 | A3F76_13085 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | 0.810 |
| OGB48422.1 | dapE | A3F76_13090 | A3F76_13080 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.815 |
| OGB48723.1 | OGB48421.1 | A3F76_02665 | A3F76_13085 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | 0.639 |
| atpA | OGB48421.1 | A3F76_14710 | A3F76_13085 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Ribosomal protein L3 N(5)-glutamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protein N5-glutamine methyltransferase family. | 0.666 |
| atpA | atpE | A3F76_14710 | A3F76_14695 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
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