STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGN43900.1P-type conjugative transfer protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
OGN43997.1
Type IV secretion system protein VirB10; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGN43901.1
Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
OGN43905.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGN43903.1
Type IV secretion system protein VirB6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OGN43899.1
P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
 0.992
OGN43898.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.976
OGN43998.1
Type IV secretion system protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.936
OGN43906.1
Type IV secretion system protein VirB2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.936
A2623_08145
Conjugal transfer protein TraG; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
OGN43999.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.906
Your Current Organism:
Caulobacterales bacterium RIFCSPHIGHO201FULL7019
NCBI taxonomy Id: 1797585
Other names: C. bacterium RIFCSPHIGHO2_01_FULL_70_19, Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.